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Protein Protocols Handbook

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  • Àú : Walker,J.
  • ÃâÆÇ»ç : Humana
  • ¹ßÇà : 1996³â 06¿ù 01ÀÏ
  • Âʼö : 0
  • ISBN : 9780896033382
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Preface
Contributors
Protein Determination by UV Absorptionp. 3
The Lowry Method for Protein Quantitationp. 7
The Bicinchoninic Acid (BCA) Assay for Protein Quantitationp. 11
The Bradford Method for Protein Quantitationp. 15
Ultrafast Protein Determinations Using Microwave Enhancementp. 21
Quantitation of Tryptophan in Proteinsp. 29
Protein Quantitation Using Flow Cytometryp. 33
Copper Iodide Staining of Proteins on Solid Phasesp. 39
Kinetic Silver Staining of Proteins Adsorbed to Microtiter Platesp. 45
Nondenaturing Polyacrylamide Gel Electrophoresis of Proteinsp. 51
SDS Polyacrylamide Gel Electrophoresis of Proteinsp. 55
Gradient SDS Polyacrylamide Gel Electrophoresis of Proteinsp. 63
Cetyltrimethylammonium Bromide Discontinuous Gel Electrophoresis of Proteins: M[subscript r]-Based Separation of Proteins with Retained Native Activityp. 67
Acetic Acid-Urea Polyacrylamide Gel Electrophoresis of Basic Proteinsp. 83
Acid-Urea-Triton Polyacrylamide Gels for Histonesp. 91
SDS-Polyacrylamide Gel Electrophoresis of Peptidesp. 101
Isoelectric Focusing of Proteins in Ultra-Thin Polyacrylamide Gelsp. 109
Isoelectric Focusing Under Denaturing Conditionsp. 115
Radioisotopic Labeling of Proteins for Polyacrylamide Gel Electrophoresisp. 121
Two-Dimensional PAGE Using Carrier Ampholyte pH Gradients in the First Dimensionp. 127
Two-Dimensional PAGE Using Immobilized pH Gradientsp. 133
Two-Dimensional PAGE Using Flat-Bed IEF in the First Dimensionp. 139
Free Zone Capillary Electrophoresisp. 143
Capillary Isoelectric Focusing with Electro-Osmotic Flow Mobilizationp. 155
Quantification of Radiolabeled Proteins in Polyacrylamide Gelsp. 161
Quantification of Proteins by Staining in Polyacrylamide Gelsp. 167
Quantitation of Proteins Separated by Electrophoresis Using Coomassie Brilliant Bluep. 173
Rapid Staining of Proteins in Polyacrylamide Gels with Nile Redp. 179
Zn[superscript 2+]-Reverse Staining of Proteins in Polyacrylamide Gelsp. 187
Protein Staining with Calconcarboxylic Acid in Polyacrylamide Gelsp. 197
Detection of Proteins and Sialoglycoproteins in Polyacrylamide Gels Using Eosin Y Stainp. 203
Electroelution of Proteins form Polyacrylamide Gelsp. 207
High-Performance Electrophoresis Chromatographyp. 215
Drying Polyacrylamide Gelsp. 223
Detection of Proteins in Polyacrylamide Gels by Silver Stainingp. 229
Autoradiography and Flourography of Acrylamide Gelsp. 235
Protein Blotting by Electroblottingp. 245
Protein Blotting by the Semidry Methodp. 249
Protein Blotting by the Capillary Methodp. 261
Protein Blotting of Basic Proteins Resolved on Acid-Urea-Triton-Polyacrylamide Gelsp. 263
Alkaline Phosphatase Labeling of Antibody Using Glutaraldehydep. 269
[Beta]-Galactosidase Labeling of Antibody Using MBSp. 271
Horseradish Peroxidase Labeling of Antibody Using Periodate Oxidationp. 273
Protein Staining and Immunodetection Using Colloidal Goldp. 275
Fluorescent Protein Staining on Nitrocellulose with Subsequent Immunodetection of Antigenp. 289
Coupling of Antibodies with Biotinp. 293
Preparation of Avidin Conjugatesp. 303
Detection of Polypeptides on Blots Using Secondary Antibodies or Protein Ap. 313
Detection of Proteins on Blots Using Avidin- or Streptavidin Biotinp. 323
Detection of Proteins on Blots Using Chemiluminescent Systemsp. 329
Carboxymethylation of Cysteine Using Iodoacetamide/Iodoacetic Acidp. 339
Performic Acid Oxidationp. 341
Succinylation of Proteinsp. 343
Pyridylethylation of Cysteine Residuesp. 345
Side-Chain Selective Chemical Modifications of Proteinsp. 349
Nitration of Tyrosinesp. 353
Ethoxyformylation of Histidinep. 357
Modification of Arginine Side Chains with p-Hydroxyphenylglyoxalp. 359
Amidation of Carboxyl Groupsp. 361
Amidination of Lysine Side Chainsp. 363
Modification of Tryptophan with 2-Hydroxy-5-Nitrobenzylbromidep. 365
Modification of Sulfhydryl Groups with DTNBp. 367
Chemical Cleavage of Proteins at Methionyl Residuesp. 369
Chemical Cleavage of Proteins at Tryptophan Residuesp. 375
Chemical Cleavage of Proteins at Aspartyl Residuesp. 381
Chemical Cleavage of Proteins at Cysteinyl Residuesp. 385
Chemical Cleavage of Proteins at Asparaginyl-Glycyl Peptide Bondsp. 389
Preparation of Peptides for Microsequencing from Proteins in Polyacrylamide Gelsp. 393
In Situ Chemical and Enzymatic Digestions of Proteins Immobilized on Miniature Hydrophobic Columnsp. 399
Enzymatic Digestion of Membrane-Bound Proteins for Peptide Mapping and Internal Sequence Analysisp. 405
Enzymatic Digestion of Proteins in Solution and in SDS Polyacrylamide Gelsp. 415
Reverse-Phase HPLC Separation of Enzymatic Digests of Proteinsp. 427
Peptide Mapping by Two-Dimensional Thin-Layer Electrophoresis - Thin-Layer Chromatographyp. 437
Peptide Mapping by Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresisp. 447
Peptide Mapping by High-Performance Liquid Chromatographyp. 453
Production of Protein Hydrolysates Using Enzymesp. 457
Amino Acid Analysis Using Precolumn Derivatization with 6-Aminoquinolyl-n-Hydroxysuccinimidyl Carbamatep. 461
Amino Acid Analysis Using Precolumn Derivatization with Phenylisothiocyanatep. 467
Molecular-Weight Estimation for Native Proteins Using Size-Exclusion High-Performance Liquid Chromatographyp. 473
Detection of Disulfide-Linked Peptides by HPLCp. 479
Diagonal Electrophoresis for Detecting Disulfide Bridgesp. 481
Estimation of Disulfide Bonds Using Ellman's Reagentp. 487
Quantitation of Cysteine Residues and Disulfide Bonds by Electrophoresisp. 489
Detection of Disulfide-Linked Peptides by Mass Spectrometryp. 495
Analyzing Protein Phosphorylationp. 501
Identification of Proteins Modified by Protein (D-Aspartyl/L-Isoaspartyl) Carboxyl Methyltransferasep. 507
Analysis of Protein Palmitoylationp. 517
Removal of Pyroglutamic Acid Residues from the N-Terminus of Peptides and Proteinsp. 525
The Dansyl Method for Identifying N-Terminal Amino Acidsp. 529
The Dansyl-Edman Method for Peptide Sequencingp. 535
Matrix-Assisted Laser Desorption Ionization Mass Spectrometry as a Complement to Internal Protein Sequencingp. 541
A Manual C-Terminal Sequencing Procedure for Peptides: The Thiocyanate Degradation Methodp. 557
C-Terminal Sequence Analysis with Carboxypeptidase Yp. 569
Rapid Epitope Mapping by Carboxypeptidase Digestion and Immunoblottingp. 573
Epitope Mapping of a Protein Using the Geysen (PEPSCAN) Procedurep. 581
Epitope Mapping of Protein Antigens by Competition ELISAp. 595
Identification of Glycoproteins on Nitrocellulose Membranes Using Lectin Blottingp. 603
A Lectin-Binding Assay for the Rapid Characterization of the Glycosylation of Purified Glycoproteinsp. 619
Staining of Glycoproteins/Proteoglycans on SDS-Gelsp. 627
Chemical Methods of Analysis of Glycoproteinsp. 633
Monosaccharide Analysis by HPAECp. 635
Monosaccharide Analysis by GCp. 639
Determination of Monosaccharide Linkage and Substitution Patterns by GC-MS Methylation Analysisp. 641
Sialic Acid Analysis by HPAEC-PADp. 645
Chemical Release of O-Linked Oligosaccharide Chainsp. 647
O-Linked Oligosaccharide Profiling by HPLCp. 649
O-Linked Oligosaccharide Profiling by HPAEC-PADp. 651
Released of N-Linked Oligosaccharide Chains by Hydrazinolysisp. 653
Enzymatic Release of O- and N-Linked Oligosaccharide Chainsp. 657
N-Linked Oligosaccharide Profiling by HPLC on Porous Graphitized Carbon (PGC)p. 659
N-Linked Oligosaccharide Profiling by HPAEC-PADp. 661
The Chloramine T Method for Radiolabeling Proteinp. 665
The Lactoperoxidase Method for Radiolabeling Proteinp. 669
The Bolton and Hunter Method for Radiolabeling Proteinp. 671
The Iodogen Method for Radiolabeling Proteinp. 673
Purification and Assessment of Quality of Radioiodinated Proteinp. 675
Conjugation of Peptides to Carrier Proteins via Glutaraldehydep. 679
Conjugation of Peptide to Carrier Proteins via m-Maleimidobenzoyl-N-Hydroxysuccinimide Ester (MBS)p. 689
Conjugation of Peptides to Carrier Protein via Carbodiimidep. 693
Raising of Polyclonal Antiserap. 695
Elution of SDS-PAGE Separated Proteins from Immobilon Membranes for Use as Antigensp. 699
Production of Highly Specific Polyclonal Antibodies Using a Combination of 2D Electrophoresis and Nitrocellulose-Bound Antigenp. 703
Production and Characterization of Antibodies Against Peptidesp. 711
Production of Antibodies Using Proteins in Gel Bandsp. 717
Purification of IgG by Precipitation with Sodium Sulfate or Ammonium Sulfatep. 721
Purification of IgG Using Caprylic Acidp. 723
Purification of IgG Using DEAE-Sepharose Chromatographyp. 725
Purification of IgG Using Ion-Exchange HPLC/FPLCp. 727
Purification of IgG by Precipitation with Polyethylene Glycol (PEG)p. 731
Purification of IgG Using Protein A or Protein Gp. 733
Purification of IgG Using Gel-Filtration Chromatographyp. 735
Purification of IgG Using Affinity Chromatography on Antigen-Ligand Columnsp. 739
Purification of IgG Using Thiophilic Chromatographyp. 743
Analysis of IgG Fractions by Electrophoresisp. 745
Ouchterlony Double Immunodiffusionp. 749
Single Radial Immunodiffusionp. 753
Rocket Immunoelectrophoresisp. 757
Two-Dimensional Immunoelectrophoresisp. 763
Immunogen Preparation and Immunization Procedures for Rats and Micep. 771
Hybridoma Productionp. 773
Screening Hybridoma Culture Supernatants Using Solid-Phase Radiobinding Assayp. 777
Screening Hybridoma Culture Supernatants Using ELISAp. 779
Growth and Purification of Murine Monoclonal Antibodiesp. 781
A Rapid Method for Generating Large Numbers of High-Affinity Monoclonal Antibodies from a Single Mousep. 783
Indexp. 793
Table of Contents provided by Blackwell. All Rights Reserved.

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A remarkable treasury of 144 state-of-the-art and highly successful analytical techniques for studying proteins and peptides. John Walker has included many updated and improved methods from his best-selling Basic Protein and Peptide Protocols as well as adding nearly 100 new ones. Each tried-and-tested protocol contains detailed step-by-step instructions time-saving troubleshooting tips alternative procedures informative explanations and comprehensive lists of reagents and suppliers-aids not usually found in standard journal recipes. The techniques do not require sophisticated and expensive apparatus.

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